Information for 1-GTGATCTTCTCDTGGA (Motif 1)

A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A
Reverse Opposite:
A C G T A G T C A G T C C G T A G A C T A C T G G T C A C T A G G T C A C G T A A T C G C T G A A C G T A G T C C G T A G T A C
p-value:1e-13
log p-value:-3.201e+01
Information Content per bp:1.769
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 34.3bp
Average Position of motif in Background83.4 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA
GTGACCTT--------
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA--
-TGACCTTTGCATGACCT
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A A C G T A C G T
A C G T G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA
------GTCACGTGGM
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA--
----NNGTCGCGTGNCAC
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGATCTTCTCDTGGA
-TGACCTTTNCNT---
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA-
-----------GTGGAT
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA--
BTGACCTCTNNHTGACCY
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A A C G T A C G T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTGATCTTCTCDTGGA
TNTTATCTTATCTT---
 A C G T A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA--
-TGACCTCTCNNTGACCT
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A A C G T A C G T
A C G T G A C T T A C G G T C A T G A C A G T C A C G T A T G C G A C T A G T C A T G C T C A G A G C T T A C G G T C A G T A C A G T C A G C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GTGATCTTCTCDTGGA---
--------TTCTTGGAAAN
 A C T G G C A T A C T G G T C A A G C T A T G C C G A T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T