Information for 4-RAGSMAKSTCTCCTTC (Motif 9)

C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A C G T A C T A G A T C G T C G A A C T G C G T A A T G C G T A C A C G T A C T G T A G C A G T C A G C T A G T C
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.746
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 17.5bp
Average Position of motif in Background59.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:RAGSMAKSTCTCCTTC
-AGGGGATTCCCCT--
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:RAGSMAKSTCTCCTTC
--------TCCCCA--
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.50
Offset:11
Orientation:forward strand
Alignment:RAGSMAKSTCTCCTTC-
-----------GCTTCC
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:RAGSMAKSTCTCCTTC--
---NNAATTCTCGNTNAN
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:RAGSMAKSTCTCCTTC
-------GTGACCTT-
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:RAGSMAKSTCTCCTTC---
--TACGAGACTCCTCTAAC
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:RAGSMAKSTCTCCTTC
----AAGATATCCTT-
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C
A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:RAGSMAKSTCTCCTTC-
-------CNGTCCTCCC
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:RAGSMAKSTCTCCTTC
AAGGCAAGTGT-----
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:RAGSMAKSTCTCCTTC-
-------NTGACCTTGA
 C T A G C T G A A C T G A T C G G T A C T G C A C A T G A T C G A C G T A G T C A G C T A T G C A G T C A C G T A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A