Information for 2-CCTGTAATCCCAG (Motif 8)

A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
Reverse Opposite:
A G T C G A C T A C T G A C T G A C T G C G T A C G A T A G C T G T C A A G T C C G T A A C T G T A C G
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.802
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.6 +/- 22.5bp
Average Position of motif in Background48.1 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CCTGTAATCCCAG
----TAATCCCN-
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCTGTAATCCCAG
---TTAATCCC--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTGTAATCCCAG
--CTTAATCCC--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCTGTAATCCCAG
---ATAATCCC--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCTGTAATCCCAG
---YTAATCCY--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTGTAATCCCAG
-CNGTCCTCCC--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGTAATCCCAG
--CCTAATCCGC-
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTGTAATCCCAG
---TTAATCCT--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTGTAATCCCAG
--GCTAATCCCC-
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCTGTAATCCCAG
---TTAATCCG--
 A G T C A G T C G A C T A C T G A C G T T C G A G C T A A C G T G T A C A G T C A G T C C G T A C T A G
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T