Information for 1-CCCGAGGAAC (Motif 4)

T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C
Reverse Opposite:
C T A G C A G T G A C T T G A C A G T C A G C T G A T C A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.653
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.60%
Number of Background Sequences with motif1668.4
Percentage of Background Sequences with motif3.48%
Average Position of motif in Targets51.3 +/- 26.4bp
Average Position of motif in Background48.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCGAGGAAC--
SCCTAGCAACAG
 T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCCGAGGAAC
--AGAGGAA-
 T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGAAC---
TACCATAGCAACGGT
 A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CCCGAGGAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGAAC-
ATTCCCAAGGGAAT
 A C G T A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCGAGGAAC-
TCCCNNGGGACN
 A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGAAC---
CCGCATAGCAACGGA
 A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCGAGGAAC
WTGSCCTSAGGS--
 A C G T A C G T A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGAAC-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGAAC-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T T G A C T G A C T G A C C T A G T C G A T C A G A C T G C T G A G C T A G A T C A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A