Information for 1-ACATGCCCTCTGC (Motif 3)

C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C
Reverse Opposite:
A C T G G T A C T C G A A T C G C G T A A C T G C T A G A C T G A G T C G T C A G A C T C T A G C G A T
p-value:1e-12
log p-value:-2.839e+01
Information Content per bp:1.802
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets58.5 +/- 22.5bp
Average Position of motif in Background51.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACATGCCCTCTGC
--CTGACCTTTG-
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTCTGC
---TGACCYCT--
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTCTGC
---TGACCTYA--
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTCTGC----
---TGACCTTTGCCCTA
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACATGCCCTCTGC
CNNTTGACCTTTG-
 A C G T C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACATGCCCTCTGC
--ATGCCCACC--
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACATGCCCTCTGC-----
---TGACCTTTGCCCTAN
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACATGCCCTCTGC----
---TGACCTTTGCCCCA
 C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACATGCCCTCTGC--
NNNNTGACCTTTNNNN
 A C G T C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACATGCCCTCTGC--
NNNGTGACCTTTGNNN
 A C G T C G T A A G T C C G T A A C G T A C T G T G A C A G T C A G T C A C G T A T G C A C G T A C T G G T A C A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A