Information for 5-GCGCCAGGTGAAA (Motif 13)

C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
Reverse Opposite:
A G C T A C G T A G C T A T G C C T G A A G T C A G T C G A C T A C T G A T C G A G T C C T A G A G T C
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.682
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif103.1
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets50.0 +/- 22.9bp
Average Position of motif in Background49.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA
--NNCAGGTGNN-
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA
--GACAGGTGTN-
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA-
GTGCCGTGTGCAAA
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA
--NNCAGGTGCG-
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA
-SDGCAGGTGCNS
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAGGTGAAA---
ATCCACAGGTGCGAAAA
 A C G T C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCGCCAGGTGAAA
--AACAGGTGT--
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA
--NNCAGGTGTN-
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCGCCAGGTGAAA
---VCAGGTRDRY
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCGCCAGGTGAAA
----CAGGTGAGG
 C T A G G A T C C T A G T A G C T A G C C T G A C T A G A C T G G A C T A T C G T C G A T C G A C T G A
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G