Information for 4-STCCCTTCAA (Motif 10)

T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G G T C A C G T A A C T G C T A G A T C G T C G A A T C G
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.786
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif283.1
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets44.9 +/- 23.3bp
Average Position of motif in Background51.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:STCCCTTCAA
---GCTTCC-
 T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:STCCCTTCAA
-CCACTTGAA
 T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-STCCCTTCAA------
TCACCCATCAATAAACA
 A C G T T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:STCCCTTCAA
NSCACTYVAV
 T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:STCCCTTCAA
ACCACTTGAA
 T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---STCCCTTCAA---
TAAGCCACTTGAATTT
 A C G T A C G T A C G T T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:STCCCTTCAA---
---ACWTCAAAGG
 T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---STCCCTTCAA---
TAAGCCACTTGAAATT
 A C G T A C G T A C G T T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---STCCCTTCAA----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:STCCCTTCAA
RSCACTYRAG
 T A G C A G C T A T G C G A T C A G T C A C G T A C G T A G T C C G T A C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G