Information for 1-CCAGMWMCCGWGGTCC (Motif 1)

A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G G T C A A G T C A G T C G C A T A G T C A C T G A C T G A C T G C G A T A C T G A G T C A C G T A C T G A C T G
p-value:1e-15
log p-value:-3.672e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.9 +/- 23.0bp
Average Position of motif in Background52.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0043.1_Max_1/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCAGMWMCCGWGGTCC
CCNNANCACGTGGTCN
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCAGMWMCCGWGGTCC----
---NNANTGGTGGTCTTNNN
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCAGMWMCCGWGGTCC-
---TCACCTCTGGGCAG
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C A C G T
A C G T A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCAGMWMCCGWGGTCC
ATGCCAGACN---------
 A C G T A C G T A C G T A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:5
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CCAGMWMCCGWGGTCC-
-----NTCGGTGGTCGC
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CCAGMWMCCGWGGTCC--
----CCCCCTTGGGCCCC
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.47
Offset:10
Orientation:forward strand
Alignment:CCAGMWMCCGWGGTCC
----------AGGTCA
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

MAX::MYC/MA0059.1/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CCAGMWMCCGWGGTCC
---GACCACGTGGT--
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C
A C G T A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:7
Orientation:forward strand
Alignment:CCAGMWMCCGWGGTCC-
-------CAAAGGTCAG
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.47
Offset:8
Orientation:forward strand
Alignment:CCAGMWMCCGWGGTCC
--------AGRGGTCA
 A G T C G T A C C G T A A C T G G T A C C G T A T G A C A G T C A G T C A C T G C G T A A C T G A C T G A C G T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A