Information for 12-WCASGCCMMGCTG (Motif 12)

C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G G T A C A C G T A C T G A C T G A C T G G T A C A T C G A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 15.7bp
Average Position of motif in Background42.9 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WCASGCCMMGCTG-
NGTCACGCTTGGCTGC
 A C G T A C G T C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX5/MA0014.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WCASGCCMMGCTG-----
GTCACGCTTGGCTGCNCNN
 A C G T C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

KLF14/MA0740.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--WCASGCCMMGCTG
GGCCACGCCCCCTT-
 A C G T A C G T C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:WCASGCCMMGCTG--
-CAGGCCNNGGCCNN
 C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:6
Orientation:forward strand
Alignment:WCASGCCMMGCTG---
------CCTGCTGAGH
 C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-WCASGCCMMGCTG-
GTCATGCHTGRCTGS
 A C G T C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:WCASGCCMMGCTG---
------CCAGCTGTTN
 C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WCASGCCMMGCTG---
-GACCCCCCGCTGCGC
 C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WCASGCCMMGCTG--
-GACCCCCCGCTGTG
 C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WCASGCCMMGCTG
CNGTCACGCCAC----
 A C G T A C G T A C G T C G A T A G T C C G T A A T G C A C T G A G T C A G T C G T A C G T C A A C T G A G T C A C G T A T C G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T