Information for 11-AGGAVAGGCACCT (Motif 11)

C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G A G C T A T C G A G T C A G T C C G A T A C G T A C G T A T G C A G T C A C G T
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.6 +/- 15.8bp
Average Position of motif in Background64.9 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGGAVAGGCACCT
-----TGACACCT
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGGAVAGGCACCT---
------TACACCTGTC
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AGGAVAGGCACCT---
-------NCACCTGTN
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGGAVAGGCACCT---
------NNCACCTGNN
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGGAVAGGCACCT----
-----SNGCACCTGCHS
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGGAVAGGCACCT---
------CGCACCTGCT
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGAVAGGCACCT----
ATAAATGACACCTATCA
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGGAVAGGCACCT---
------AACACCTGCT
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGGAVAGGCACCT------
--NNTNCGCACCTGTNGAN
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGGAVAGGCACCT----
-NNGGCGACACCTCNNN
 C G T A A C T G A T C G C G T A T G C A C G T A A C T G A C T G A T G C C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C