Information for 4-AGGKCTACACTGM (Motif 9)

C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
Reverse Opposite:
C A T G G T A C G T C A A C T G A C G T A T C G A G C T C G T A A T C G T G A C A G T C G T A C A G C T
p-value:1e-11
log p-value:-2.692e+01
Information Content per bp:1.695
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif86.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.6 +/- 25.3bp
Average Position of motif in Background41.5 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGKCTACACTGM
-TGTCTAGACG--
 C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGKCTACACTGM
AGGCCTNG-----
 C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGKCTACACTGM------
--AATCGCACTGCATTCCG
 C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGKCTACACTGM
AGGCCTAG-----
 C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGKCTACACTGM
TWGTCTGV-----
 C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AGGKCTACACTGM
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGGKCTACACTGM--
NNGTATGTGCACATNNN
 A C G T A C G T C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGGKCTACACTGM---
NSTGTTTRCWCAGBNNN
 A C G T C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGGKCTACACTGM
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGGKCTACACTGM--
NTNTATGTGCACATNNN
 A C G T A C G T C T G A C A T G C T A G A C T G A T G C A C G T C T G A A T G C T G C A G T A C A C G T C A T G G T A C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A