Information for 23-GGTTRGAGGKARMCCT (Motif 37)

A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G A C T G A G C T A G C T G T C A A G T C A G T C A C G T A G T C A G T C C G T A C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.874
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 7.9bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTTRGAGGKARMCCT
AGGGGTCAGAGGTCA----
 A C G T A C G T A C G T A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGTTRGAGGKARMCCT
-BTKGGCGGGAAA---
 A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGTTRGAGGKARMCCT
GAGGTCAAAGGTCA----
 A C G T A C G T A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGTTRGAGGKARMCCT
-TTTGGCGGGAAA---
 A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGTTRGAGGKARMCCT
---GGGCGGGAAGG--
 A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGTTRGAGGKARMCCT
----GGCGGGAARN--
 A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGTTRGAGGKARMCCT
GAGGTCAAAGGTCA----
 A C G T A C G T A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GGTTRGAGGKARMCCT
AAAGGTCAAAGGTCAAC--
 A C G T A C G T A C G T A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GGTTRGAGGKARMCCT-
GCTGGGGGGTACCCCTT
 A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGTTRGAGGKARMCCT
KGTTGCTAGGMAACA-
 A C T G A C T G C G A T A C G T C T A G A C T G C G T A C T A G A C T G A C G T C T G A C T G A G T A C A G T C A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T