Information for 9-AGCMCWAGAC (Motif 36)

C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C
Reverse Opposite:
A T C G A C G T G T A C G A C T G C T A C A T G C A T G T C A G G T A C C G A T
p-value:1e-6
log p-value:-1.549e+01
Information Content per bp:1.633
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif232.6
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets49.1 +/- 26.6bp
Average Position of motif in Background47.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCMCWAGAC
CAGCC------
 A C G T C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCMCWAGAC-
AGCCTCAGGCA
 C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCMCWAGAC-
AGCCTCAGGCA
 C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCMCWAGAC
GAGSCCGAGC-
 A C G T C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCMCWAGAC-
CGCCTCAGGCA
 C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGCMCWAGAC--
----BCAGACWA
 C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGCMCWAGAC-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCMCWAGAC--
----CCAGACAG
 C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGCMCWAGAC---
CAGGCCNNGGCCNN
 A C G T C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCMCWAGAC----
----CCAGACRSVB
 C G T A C A T G A G T C G T A C G T A C C G A T C T G A A C T G T G C A T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C