Information for 16-CCTTACTAACAGA (Motif 32)

A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T C T A G A C G T A G C T C G T A A C T G A G C T G T C A C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 25.9bp
Average Position of motif in Background44.1 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTTACTAACAGA
TCTTTANTAATANN
 A C G T A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTTACTAACAGA
SCCTAGCAACAG-
 A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTTACTAACAGA-
--TGAGTGACAGSC
 A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTTACTAACAGA---
-AAAAATAACAAACGG
 A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CCTTACTAACAGA----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTACTAACAGA
NNGCACCTTTCTCC----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCTTACTAACAGA
-NTGATTGACAGN
 A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTTACTAACAGA
-BTGABTGACAGS
 A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCTTACTAACAGA
TACCATAGCAACGGT
 A C G T A C G T A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCTTACTAACAGA
GTTAACTAGN---
 A G T C A G T C A C G T A C G T C T G A A G T C A C G T C T G A G T C A A G T C C G T A A C T G C T G A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T