Information for 4-CCTTATCAGG (Motif 3)

G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
Reverse Opposite:
A T G C A G T C G A C T T C A G C G T A G C A T T G C A C G T A A C T G A C T G
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.505
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.09%
Number of Background Sequences with motif374.6
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets60.9 +/- 26.5bp
Average Position of motif in Background51.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATCAGG
TNCCATATATGG
 A C G T A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATCAGG--
TNCCATATATGGNA
 A C G T A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTTATCAGG---
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

SRF/MA0083.3/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTTATCAGG---
TGACCATATATGGTCA
 A C G T A C G T A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTATCAGG
CCATATATGG
 G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTTATCAGG
NCCTTATCTG-
 A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTTATCAGG
AACCTTATAT--
 A C G T A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTTATCAGG
GNCTATAAAAGG
 A C G T A C G T G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTTATCAGG
YCTTATCWVN
 G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTTATCAGG
YCTTATCTBN
 G T A C T G A C G C A T A C G T C G T A G C A T A G T C C T G A C T A G T A C G
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C