Information for 10-ATGCCTGTCTGTG (Motif 20)

C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
Reverse Opposite:
A T G C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G G T A C C G T A A C G T
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.882
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 12.9bp
Average Position of motif in Background43.3 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGCCTGTCTGTG
--VBSYGTCTGG-
 C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATGCCTGTCTGTG
GTCATGCHTGRCTGS-
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATGCCTGTCTGTG
----CTGTCTGG-
 C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCTGTCTGTG
RCATTCCWGG-----
 A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCTGTCTGTG
RCATTCCWGG-----
 A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGCCTGTCTGTG
----TWGTCTGV-
 C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCTGTCTGTG
GCATTCCAGN-----
 A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATGCCTGTCTGTG-
--GSCTGTCACTCA
 C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGCCTGTCTGTG
ATGCCAGACN---
 C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGCCTGTCTGTG
ACTATGCCAACCTACC
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G A T A C T G C G A T A G T C A C G T C T A G A C G T A T C G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C