Information for 2-MTGGGCCTGAYAAGTG (Motif 2)

T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A G C T C T G A C G A T A T G C G T C A A C T G A T C G A T G C G T A C A G T C C G T A A C T G
p-value:1e-15
log p-value:-3.635e+01
Information Content per bp:1.751
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 24.9bp
Average Position of motif in Background54.9 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.62
Offset:9
Orientation:forward strand
Alignment:MTGGGCCTGAYAAGTG---
---------TTRAGTGSYK
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG--
--------NTCAAGTGGN
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG---
---------TTGAGTGSTT
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG-
--------NTCAAGTGG
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG--
---------TTAAGTGGN
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG--
--------CTYRAGTGSY
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG--
---------TTAAGTGGT
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:MTGGGCCTGAYAAGTG--
--------BTBRAGTGSN
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG-
---------TTAAGTGC
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:MTGGGCCTGAYAAGTG---
---------TTAAGTGCTT
 T G A C C G A T A C T G C A T G A T C G A T G C A G T C A C G T A T C G C G T A G A C T C T G A C G T A A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T