Information for 7-TGCAGAGACTGTGCCT (Motif 13)

C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
Reverse Opposite:
C G T A A C T G A T C G A T G C C T G A A G T C C G T A A C T G A C G T A G T C A C G T A T G C G C A T A C T G A G T C G C T A
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.810
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 21.5bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCAGAGACTGTGCCT
AGNACAGNCTGTTCTN
 C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCAGAGACTGTGCCT
VAGRACAKNCTGTBC--
 A C G T C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCAGAGACTGTGCCT
NAGNACANNNTGTNCT-
 A C G T C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:TGCAGAGACTGTGCCT--
--------CTGTTCCTGG
 C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCAGAGACTGTGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCAGAGACTGTGCCT
-GRACAGWMTGTYCTB
 C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCAGAGACTGTGCCT
-GAACADWATGTTCTT
 C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCAGAGACTGTGCCT
-GCAGTGATTT-----
 C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGCAGAGACTGTGCCT
-------GCTGTG---
 C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCAGAGACTGTGCCT
GGGAACACAATGTTCCC
 A C G T C A G T A C T G G T A C C G T A A T C G C G T A C T A G C G T A G T A C A C G T A C T G A G C T A T C G A T G C G T A C A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C