Information for 6-CCGCAGGGAGAGATAA (Motif 12)

A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A
Reverse Opposite:
A G C T A C G T C G T A A C G T G T A C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C T G G A T C A C T G A C T G
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.4 +/- 16.5bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGCAGGGAGAGATAA
CACAGCAGGGGG------
 A C G T A C G T A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CCGCAGGGAGAGATAA--
-------NNGAGATAAGA
 A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGCAGGGAGAGATAA
NTCCCCTCAGGGANT-----
 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCGCAGGGAGAGATAA---
--------ANAGATAAGAA
 A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGCAGGGAGAGATAA
NTCGCCTCAGGCAAT-----
 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CCGCAGGGAGAGATAA------
--------NCAGATAAGAANNN
 A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAGGGAGAGATAA
TCCCNNGGGACN-----
 A C G T A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CCGCAGGGAGAGATAA---
---------NAGATAAGNN
 A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.53
Offset:10
Orientation:forward strand
Alignment:CCGCAGGGAGAGATAA--
----------AGATAAGA
 A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.53
Offset:10
Orientation:forward strand
Alignment:CCGCAGGGAGAGATAA--
----------AGATAASR
 A G T C G T A C C T A G A G T C C G T A A C T G A C T G A C T G C G T A A C T G C G T A C A T G C G T A G C A T G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A