Information for 6-RGCACYMMTGTCA (Motif 11)

C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A G T C C G T A A C G T A C T G C T A G A C T G A C G T A C T G A G T C A G C T
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 31.0bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.69
Offset:7
Orientation:reverse strand
Alignment:RGCACYMMTGTCA-
-------NTGTCAN
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:RGCACYMMTGTCA-
------CCTGTCAA
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:RGCACYMMTGTCA-
------GCTGTCAA
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.64
Offset:8
Orientation:forward strand
Alignment:RGCACYMMTGTCA---
--------TGTCANYT
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.62
Offset:7
Orientation:forward strand
Alignment:RGCACYMMTGTCA--
-------YTGWCADY
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:RGCACYMMTGTCA--
-----VGCTGWCAVB
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGCACYMMTGTCA
-TGACACCTGTCA
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGCACYMMTGTCA
-TGACACCTGTCA
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

TGIF2/MA0797.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGCACYMMTGTCA
-TGACAGCTGTCA
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RGCACYMMTGTCA-----
------SCTGTCARCACC
 C T G A A C T G A G T C C G T A A G T C A G T C G T A C G T C A A C G T A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C