Information for 3-TGGCAGTGCC (Motif 8)

A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
Reverse Opposite:
A T C G C A T G A G T C T G C A T A G C C A G T A C T G G A T C T A G C C T G A
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.649
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif17.57%
Number of Background Sequences with motif4050.8
Percentage of Background Sequences with motif9.46%
Average Position of motif in Targets50.5 +/- 25.7bp
Average Position of motif in Background50.3 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGTGCC---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTGCC
CTTGGCAA----
 A C G T A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGTGCC
NTTGGCANN---
 A C G T A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGTGCC--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGTGCC
TTGGCA-----
 A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTGCC
NNTTGGCANN---
 A C G T A C G T A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGTGCC
GGTTGGCAT----
 A C G T A C G T A C G T A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGCAGTGCC-------
-GGGTGTGCCCAAAAGG
 A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGGCAGTGCC----
-----ATGCCCACC
 A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCAGTGCC
TGGCAGTTGN
 A G C T A T C G C T A G T G A C G T C A A T C G A C G T T C A G G T A C T A G C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G