Information for 12-TCAGCCGGTG (Motif 25)

A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C G T A C T C A G T A C G A G T C A C G T A C T G T C G A
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.845
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif170.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets41.3 +/- 30.8bp
Average Position of motif in Background51.8 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCGGTG
DCTCAGCAGG--
 A C G T A C G T A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCGGTG---
DCHCAGCAGGRGGCC
 A C G T A C G T A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCAGCCGGTG---
-SDGCAGGTGCNS
 A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TFAP4/MA0691.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCCGGTG
ATCAGCTGTT-
 A C G T A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCAGCCGGTG-
CACAGCAGGGGG
 A C G T A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCAGCCGGTG
HCAGCTGDTN
 A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCAGCCGGTG
NCAGCTGCTG
 A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCAGCCGGTG
-CAGCTGNT-
 A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCAGCCGGTG-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAGCCGGTG---
GAGCAACAGGTGGTT
 A C G T A C G T A G C T A G T C C G T A A C T G A T G C A G T C C A T G C T A G A C G T A C T G A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T