Information for 5-RGATCTCAGCACASAG (Motif 9)

C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
Reverse Opposite:
G A T C A C G T T A C G C G A T A T C G A C G T A C T G A G T C A C G T A T C G C G T A A C T G C G T A A C G T A G T C G A T C
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 14.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RGATCTCAGCACASAG
AAATCACAGCA-----
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RGATCTCAGCACASAG
----GTCAGCANNTN-
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:RGATCTCAGCACASAG----
----CGAAGCACACAAAATA
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MAFK/MA0496.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RGATCTCAGCACASAG
CTGAGTCAGCAATTT-
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGATCTCAGCACASAG
AAATCACTGC------
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RGATCTCAGCACASAG
-SCTGTCARCACC---
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:RGATCTCAGCACASAG
----CACAGCAGGGGG
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGATCTCAGCACASAG
-TGAGTCAGCA-----
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGATCTCAGCACASAG
-HWWGTCAGCAWWTTT
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
A C G T G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RGATCTCAGCACASAG
---NGTCAGCANTTT-
 C T A G C T A G G T C A C G A T A G T C C G A T A T G C C G T A A C T G A G T C C G T A A T G C C G T A A T G C C G T A C A T G
A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T