Information for 13-GATGWMGATT (Motif 19)

A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T
Reverse Opposite:
C T G A C G T A A C G T A G T C A C G T G C T A A G T C G T C A A C G T A G T C
p-value:1e-5
log p-value:-1.305e+01
Information Content per bp:1.853
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif47.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets66.0 +/- 23.1bp
Average Position of motif in Background44.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GATGWMGATT---
--TGTGGATTNNN
 A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GATGWMGATT--
NNTGTGGATTSS
 A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GATGWMGATT---
GAATGACGAATAAC
 A C G T A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATGWMGATT---
NAGATWNBNATCTNN
 A C G T A C G T A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GATGWMGATT
GATGACGT--
 A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T
A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATGWMGATT-
-ATGAATATTC
 A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATGWMGATT--
-AAGAGGATTAG
 A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GATGWMGATT--
TATGCWAATBAV
 A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATGWMGATT-----
CGTTGGGGATTAGCCT
 A C G T A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GATGWMGATT-
TTATGCAAATTA
 A C G T A C T G C G T A A C G T A C T G C G A T G T C A A C T G C G T A A C G T A G C T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A