p-value: | 1e-8 |
log p-value: | -1.891e+01 |
Information Content per bp: | 1.663 |
Number of Target Sequences with motif | 34.0 |
Percentage of Target Sequences with motif | 4.64% |
Number of Background Sequences with motif | 263.2 |
Percentage of Background Sequences with motif | 1.45% |
Average Position of motif in Targets | 47.3 +/- 28.2bp |
Average Position of motif in Background | 48.6 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFIA/MA0670.1/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGGCTGCCAA-- --GGTGCCAAGT |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGGCTGCCAA- ---TTGCCAAG |
|
|
|
NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGGCTGCCAA- --CGTGCCAAG |
|
|
|
NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TGGCTGCCAA ----TGCCAA |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCTGCCAA TWGTCTGV--- |
|
|
|
MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGGCTGCCAA --GCTGTCAA |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCTGCCAA-- TGTCTGDCACCT |
|
|
|
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGGCTGCCAA- -VGCTGWCAVB |
|
|
|
SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCTGCCAA-- CTGTCTGTCACCT |
|
|
|
PH0170.1_Tgif2/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGGCTGCCAA--- AACTAGCTGTCAATAC |
|
|
|