Information for 12-TTGGACTTGA (Motif 19)

A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A
Reverse Opposite:
A C G T T G A C C T G A C G T A A C T G A C G T A G T C A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.926
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.9 +/- 24.4bp
Average Position of motif in Background54.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TTGGACTTGA---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGGACTTGA-
-TGACCTTGAN
 A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGACTTGA
BNTGDCCTTG-
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGGACTTGA-
-TGACCTTGAV
 A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGACTTGA----
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGGACTTGA-----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTGGACTTGA-
--CCACTTGAA
 A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGGACTTGA
-TTGACTTTT
 A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGACTTGA
NATGACCTTGA
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTGGACTTGA-------
-TGGACTTTGNNCTNTG
 A C G T A C G T A C T G A C T G C G T A A G T C A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G