Information for 5-ACGGCBCAGACGG (Motif 9)

C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G
Reverse Opposite:
A G T C A G T C A C T G C G A T A G T C A C G T A C T G T A C G A C T G A G T C G A T C A C T G A G C T
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.0 +/- 22.7bp
Average Position of motif in Background39.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:ACGGCBCAGACGG
-----CCAGACAG
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:ACGGCBCAGACGG--
-----CCAGACRSVB
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACGGCBCAGACGG----
CAAATCCAGACATCACA
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ACGGCBCAGACGG
-----BCAGACWA
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACGGCBCAGACGG
--TGCCCAGNHW-
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACGGCBCAGACGG--
AGCGGCACACACGCAA
 A C G T C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACGGCBCAGACGG-----
-AAGGCCAGATGGTCCGG
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACGGCBCAGACGG---
-CCACACAGCAGGAGA
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACGGCBCAGACGG---
-CCACACAGCAGGAGA
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACGGCBCAGACGG
--TGCGCAGGCGC
 C T G A G T A C C T A G A C T G A G T C A G T C A G T C C G T A A C T G C G T A A G T C C T A G A C T G
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C