Information for 18-CAGGTTTGGTTGG (Motif 27)

A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A G T C A G T C C G T A C G T A C G T A A G T C A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 3.7bp
Average Position of motif in Background22.9 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGGTTTGGTTGG
CAGGTGAGG----
 A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGTTTGGTTGG
AACAGGTGT------
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGGTTTGGTTGG
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGGTTTGGTTGG
-----TTGATTGN
 A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTTTGGTTGG
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGGTTTGGTTGG
VCAGGTRDRY----
 A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGGTTTGGTTGG----
NNNNGTTGATTGGGTCG
 A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTTTGGTTGG
NNCAGGTGCG-----
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTTTGGTTGG
NNCAGGTGNN-----
 A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGGTTTGGTTGG------
---NGTAGGTTGGCATNNN
 A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T