Information for 2-ATTAAATTAAABC (Motif 5)

C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C
Reverse Opposite:
C T A G T A C G A C G T C G A T C G A T C G T A C G T A A C G T A C G T G A C T C G T A C G T A A G C T
p-value:1e-12
log p-value:-2.943e+01
Information Content per bp:1.823
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.2 +/- 21.6bp
Average Position of motif in Background55.6 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTAAABC-
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATTAAABC
TAATTAAATTA----
 A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTAAABC-
ANNATTTAATTAATTNN
 A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0100.1_Lmx1a/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTAAABC-
NNTTTTTAATTAATTCG
 A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTAAATTAAABC-
AGTTTTTAATTAATTTG
 A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATTAAABC
TAATTAAATTA----
 A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ATTAAATTAAABC
NNNTATTGAATTGNNN-
 A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATTAAABC
TAATTAAATTA----
 A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTAAABC-
NNTATTTAATTAATTNN
 A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0011.1_Alx1_2/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTAAABC-
NNNAATTAATTAANGNG
 A C G T A C G T A C G T C T G A A C G T A C G T C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A T G C A G T C A C G T
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G