Information for 10-GCATTAACTA (Motif 35)

A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.241e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 21.3bp
Average Position of motif in Background71.1 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCATTAACTA--
--GTTAACTAGN
 A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GCATTAACTA-
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAACTA------
GANGTTAACTAGTTTNN
 A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Alx4/MA0853.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCATTAACTA------
CGCATTAATTAATTACC
 A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C

PH0002.1_Alx4/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCATTAACTA------
CGCATTAATTAATTACC
 A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A T C G G A T C C T G A G A C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G C T G C A T G T C A A T G C A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCATTAACTA-----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0135.1_Phox2a/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCATTAACTA----
CAGCATTAATTAGTAG
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A G T C T C G A A C T G G T A C T C G A G A C T A G C T C G T A C T G A C G A T A C G T C T G A C T A G A G C T T C A G T A C G

PH0159.1_Rhox6/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAACTA-----
NNGCATTAATTAANGCA
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C G T A A T C G T G A C T C G A G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A C T G C A T G A G T C C G T A

PH0062.1_Hoxb7/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAACTA----
TNNCATTAATTANTNC
 A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

Alx1/MA0854.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCATTAACTA------
CGAATTAATTAATCACC
 A C G T A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T C G G T C A C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T G A T C G T C A G A T C G A T C