Information for 18-SMGMCTGAACYCAGTG (Motif 30)

A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G
Reverse Opposite:
A T G C G C T A A G T C A C G T A C T G T C A G A C T G A C G T G A C T A T G C G T C A A T C G A C T G T A G C A C T G A T G C
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.671
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif95.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets54.4 +/- 21.2bp
Average Position of motif in Background50.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG
-----TGACCTYA---
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG------
--NNNTGAACTCNNTGACCTCN
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG
-----TGACCYCT---
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

Vdr/MA0693.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG-----
-----TGAACTCNATGAACTC
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG-
NNNNTTGACCCCTNNNN
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG
-----TGACCT-----
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:SMGMCTGAACYCAGTG-
TGTCGTGACCCCTTAAT
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG
-CNNTTGACCTTTG--
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG-
NNANTTGACCCCTNNNN
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

RXRA::VDR/MA0074.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:SMGMCTGAACYCAGTG----
-----TGAACCCGATGACCC
 A T C G G T A C A T C G T G A C A T G C C A G T A T C G C T G A T G C A A G T C A G T C A G T C G T C A T C A G C G A T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C