Information for 6-CGAAACCTCG (Motif 29)

A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C T A C G T G C A A C T G A C T G A C G T A G C T A G C T A G T C A C T G
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.864
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.3 +/- 33.1bp
Average Position of motif in Background46.0 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CGAAACCTCG
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CGAAACCTCG
ATAAACCGAAACCAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CGAAACCTCG--
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CGAAACCTCG--
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGAAACCTCG
ACTGAAACCA--
 A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CGAAACCTCG
GAGAACCGAAACTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CGAAACCTCG
CAAAATCGAAACTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGAAACCTCG--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGAAACCTCG-
--AAACCGCAA
 A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGAAACCTCG
TGACACCT--
 A G T C A C T G C T G A T C G A C G T A A G T C A G T C A C G T A G T C A C T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T