Information for 14-CWGGCAAACCACAGAC (Motif 20)

A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
Reverse Opposite:
A T C G A G C T G T A C C G A T T A C G A C G T C T A G A C T G C A G T A G C T A C G T A T C G A T G C G T A C C G T A A C T G
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.721
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 19.5bp
Average Position of motif in Background61.5 +/- 0.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWGGCAAACCACAGAC
-----AAACCACAGAN
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CWGGCAAACCACAGAC
----NAAACCACAG--
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CWGGCAAACCACAGAC
-----AAACCACAGC-
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CWGGCAAACCACAGAC
----NWAACCACADNN
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CWGGCAAACCACAGAC
-----AAACCACANN-
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:CWGGCAAACCACAGAC----
----------CCAGACRSVB
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CWGGCAAACCACAGAC
--TCCAATCCACA---
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CWGGCAAACCACAGAC
CTTGGCAA---------
 A C G T A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CWGGCAAACCACAGAC
-AGAGRRACAGCWGAC
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C
A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CWGGCAAACCACAGAC------
-----CAAATCCAGACATCACA
 A G T C G C A T A C T G A T C G A T G C G T C A C T G A G C T A A G T C A G T C C G T A A G T C C G T A A C T G C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A