Information for 6-GTGAWTTGAGGTCABC (Motif 7)

T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
Reverse Opposite:
T C A G T A G C A C G T A T C G C G T A T G A C G A T C A G C T T A G C C G T A C G T A G C A T G C A T A G T C C G T A A T G C
p-value:1e-13
log p-value:-3.009e+01
Information Content per bp:1.735
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 25.0bp
Average Position of motif in Background72.4 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGAWTTGAGGTCABC
TGTGGATTNNN------
 A C G T T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGAWTTGAGGTCABC
NNTGTGGATTSS-------
 A C G T A C G T A C G T T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTGAWTTGAGGTCABC-
-----ATGACGTCATCN
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTGAWTTGAGGTCABC
------TGACGTCATC
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTGAWTTGAGGTCABC-
-----ATGACGTCAYYN
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGAWTTGAGGTCABC
GGGTTACTANAGGTCA--
 A C G T A C G T T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTGAWTTGAGGTCABC-
-----RTGACGTCAYCN
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGAWTTGAGGTCABC
-AAAGATGATGTCATC
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
A C G T C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTGAWTTGAGGTCABC
------TRAGGTCA--
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GTGAWTTGAGGTCABC-
-----ATGACGTCATCN
 T A C G A C G T C T A G C G T A C G T A A C G T A C G T A T C G C T G A C T A G A C T G A C G T A T G C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A