Information for 4-CAACCAAARGGCCTGA (Motif 5)

G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C T G C A T C A G A T C G A G T C G T A C A G C T C A G T A G C T C G A T A C T G A T C G C G A T C G A T A C T G
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.724
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.8 +/- 21.4bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAACCAAARGGCCTGA
CCAATCAA---------
 A C G T G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAACCAAARGGCCTGA
CCATCAATCAAA--------
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAACCAAARGGCCTGA
--AACAGATGGC----
 G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CAACCAAARGGCCTGA
TGGACCAATCAGCACTCT---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAACCAAARGGCCTGA-
---TCAGNGAGCGTGAC
 G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CAACCAAARGGCCTGA
--------AGGCCTNG
 G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CAACCAAARGGCCTGA
CGACCCAATCAACGGTG----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAACCAAARGGCCTGA
--AACAKATGGY----
 G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CAACCAAARGGCCTGA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAACCAAARGGCCTGA---
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C C G T A C G T A A T G C A G T C C G T A C T G A G T C A T C G A C A T G C T A G A T G C A G T C A C G T A C T G C T G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G