Information for 6-STAATCTGVGCAC (Motif 24)

A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C
Reverse Opposite:
C T A G C G A T A C T G A G T C A G C T A G T C C G T A A C T G G T C A C G A T A G C T C G T A T A C G
p-value:1e-9
log p-value:-2.253e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.9 +/- 20.5bp
Average Position of motif in Background45.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:STAATCTGVGCAC
--WDNCTGGGCA-
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:STAATCTGVGCAC-----
--NNTTTGCACACGGCCC
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:STAATCTGVGCAC-----
-NTNTATGTGCACATNNN
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:STAATCTGVGCAC-----
-NNGTATGTGCACATNNN
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:STAATCTGVGCAC------
--NNNNTGAGCACTGTNNG
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:STAATCTGVGCAC----
-NNNNTTGGGCACNNCN
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:STAATCTGVGCAC
GWAAYHTGABMC-
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:STAATCTGVGCAC
-AAATCACAGCA-
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-STAATCTGVGCAC
NNTAATCCNGNCNN
 A C G T A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:STAATCTGVGCAC
-AAATCACTGC--
 A T G C C G A T T C G A C G T A A C G T T G A C A C G T A C T G T C G A T A C G A G T C C G T A A G T C
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T