Information for 19-AGTMCAGTGG (Motif 37)

C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A A G T C A C G T A C T G A C G T C T G A G T A C A C G T
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.789
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.4 +/- 29.2bp
Average Position of motif in Background47.0 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AGTMCAGTGG-
-NTCAAGTGGN
 C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AGTMCAGTGG----
AATTTCAAGTGGCTTN
 A C G T A C G T C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AGTMCAGTGG----
AANTTCAAGTGGCTTN
 A C G T A C G T C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AGTMCAGTGG
-NTCAAGTGG
 C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AGTMCAGTGG----
AAATTCAAGTGGNTTN
 A C G T A C G T C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGTMCAGTGG-
-BTBRAGTGSN
 C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGTMCAGTGG--
--TTRAGTGSYK
 C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGTMCAGTGG----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGTMCAGTGG----
AATNTTAAGTGGNTNN
 A C G T A C G T C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGTMCAGTGG----
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T C G T A A C T G A G C T G T C A G T A C C G T A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T