Information for 10-CAGGCAGDGGGCDGAG (Motif 35)

A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C G A T C C T A G A G T C A G T C A G T C G C A T A T G C A C G T A C T G A G T C T A G C A G C T A C T G
p-value:1e-9
log p-value:-2.078e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.4 +/- 20.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CAGGCAGDGGGCDGAG-
-----RGKGGGCGGAGC
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAGGCAGDGGGCDGAG-
--GGGNGGGGGCGGGGC
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T
A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CAGGCAGDGGGCDGAG---
-----AGGGGGCGGGGCTG
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGDGGGCDGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CAGGCAGDGGGCDGAG-
------GGGGGCGGGGC
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGGCAGDGGGCDGAG-
---GGCGGGGGCGGGGG
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CAGGCAGDGGGCDGAG--
------GGGGGCGGGGCC
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAGGCAGDGGGCDGAG---
----NNVDGGGYGGGGCYN
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGGCAGDGGGCDGAG-
-----RGKGGGCGKGGC
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CAGGCAGDGGGCDGAG-
-------GGGGNGGGGC
 A G T C T C G A A T C G A C T G A G T C G T C A A T C G C G T A A C T G A C T G A C T G G A T C C A T G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C