Information for 18-CACAGGCTCAGAG (Motif 33)

A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
Reverse Opposite:
G A T C A C G T G T A C C G A T A T C G C T G A A T C G T A G C G A T C G C A T A T C G C A G T A T C G
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.680
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.36%
Number of Background Sequences with motif90.3
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets44.7 +/- 25.7bp
Average Position of motif in Background47.6 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACAGGCTCAGAG--------
-YCAGGCWCAGTACCAGGCTC
 A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGCTCAGAG
GCTCGGSCTC----
 A C G T A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACAGGCTCAGAG
-CCAGGAACAG--
 A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGCTCAGAG
GCGCATGCGCAG--
 A C G T A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCTCAGAG
AGCCTCAGGCA-----
 A C G T A C G T A C G T A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CACAGGCTCAGAG-
----TGCCCAGNHW
 A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCTCAGAG
CGCCTCAGGCA-----
 A C G T A C G T A C G T A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACAGGCTCAGAG
CACAGN-------
 A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACAGGCTCAGAG
AGCCTCAGGCA-----
 A C G T A C G T A C G T A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CACAGGCTCAGAG
NTNGCCTCAGGCNNN---
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A A T G C C G T A C T A G A C T G A T G C G A C T A T G C G C T A C A T G C G T A C T A G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T