p-value: | 1e-10 |
log p-value: | -2.509e+01 |
Information Content per bp: | 1.813 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.95% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 55.0 +/- 26.5bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LIN54/MA0619.1/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTTGATTTAAAAG ---NATTCAAAT- |
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PB0001.1_Arid3a_1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTTGATTTAAAAG-- GGGTTTAATTAAAATTC |
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Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTTGATTTAAAAG-- -----TTTAATTGCN |
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TATA-Box(TBP)/Promoter/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTTGATTTAAAAG- --GNCTATAAAAGG |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GTTGATTTAAAAG- ----ACATCAAAGG |
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Arid3b/MA0601.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTTGATTTAAAAG --NTAATTAATAT |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTTGATTTAAAAG- -NTGATTTATGGCC |
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PH0100.1_Lmx1a/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTTGATTTAAAAG-- CGAATTAATTAAAAACC |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTTGATTTAAAAG-- -----TTTGAAACCG |
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Gfi1/MA0038.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTGATTTAAAAG CNGTGATTTN---- |
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