Information for 2-AWTTMMTTCCAGM (Motif 5)

C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G C G T A G T C A A C G T A C G T C T G A G T C A C G T A A C G T
p-value:1e-13
log p-value:-3.023e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 22.2bp
Average Position of motif in Background46.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM
---GCATTCCAGN
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM--
-----ATGCCAGACN
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM
---RCATTCCWGG
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C
A C G T A C G T A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AWTTMMTTCCAGM-
NANANTTAATCCCNNNN
 A C G T A C G T A C G T C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AWTTMMTTCCAGM---
YTAATTRAWWCCAGATGT
 A C G T A C G T C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

PB0011.1_Ehf_1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM----
--TNACTTCCGGNTNNN
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C T G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G T C A G C G A T G T A C T G A C A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM--
--TTACTTCCTNGTN
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM-
----ACTTCCGGTN
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

Lhx3/MA0135.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AWTTMMTTCCAGM
GATTAATTAATTT----
 A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AWTTMMTTCCAGM
---RCATTCCWGG
 C G T A C G A T A C G T A G C T G T C A G T C A A C G T A C G T A G T C A G T C C G T A A C T G G T A C
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G