Information for 20-GGAGWTGTACTTY (Motif 40)

A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
Reverse Opposite:
C T A G C T G A C G T A A T C G A C G T C T G A G T A C G C T A C G T A A G T C A C G T A T G C A G T C
p-value:1e-5
log p-value:-1.352e+01
Information Content per bp:1.696
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif240.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets47.9 +/- 27.7bp
Average Position of motif in Background49.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGAGWTGTACTTY
GGGAATTGTAGT--
 A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.70
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGWTGTACTTY
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------GGAGWTGTACTTY
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGAGWTGTACTTY
TGGAACAGMA----
 A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GGAGWTGTACTTY-
--AGTTTCAKTTTC
 A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGAGWTGTACTTY
DCCGGAARYN------
 A C G T A C G T A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGAGWTGTACTTY
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGAGWTGTACTTY
GGGATTGCATNN-
 A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GGAGWTGTACTTY
NNTGGAAANN------
 A C G T A C G T A C G T A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGAGWTGTACTTY
GGAAGTGAAAST-
 A C T G A T C G G T C A T C A G G C A T C G A T A C T G G A C T T G C A T A G C A C G T G A C T A G T C
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T