Information for 19-GGGGTATTTTTAT (Motif 39)

A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.438e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 29.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGGGTATTTTTAT-
--GCTATTTTTAGC
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGGGTATTTTTAT-
--KCTATTTTTRGH
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGGTATTTTTAT---
-TTCTATTTTTAGNNN
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGGTATTTTTAT------
---NNANTTTTATTGGNNN
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GGGGTATTTTTAT---
------NTTTTATTGG
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGGTATTTTTAT---
--TGTATATATATACC
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GGGGTATTTTTAT---
------TTTTTATTGG
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGGTATTTTTAT-
--TCTATTTTTAGA
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGGTATTTTTAT-
--GCTATTTATAGC
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGGTATTTTTAT------
---NNAATTTTATTGGNTN
 A C T G A C T G A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T