Information for 20-KMCAKTKGSCAGGCCY (Motif 36)

C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
Reverse Opposite:
C T A G A T C G A C T G T A G C A G T C C A G T A C T G A T G C A T G C G T A C T C G A T G A C A C G T A C T G C A T G G T A C
p-value:1e-7
log p-value:-1.745e+01
Information Content per bp:1.640
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.59%
Number of Background Sequences with motif1012.8
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets45.4 +/- 27.0bp
Average Position of motif in Background50.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--KMCAKTKGSCAGGCCY
NTGCCCTTGGGCGN----
 A C G T A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:KMCAKTKGSCAGGCCY
-----TTGCCAAG---
 C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KMCAKTKGSCAGGCCY
TCACCTCTGGGCAG----
 A C G T A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----KMCAKTKGSCAGGCCY
GAAGAACAGGTGTCCG----
 A C G T A C G T A C G T A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--KMCAKTKGSCAGGCCY
VNAVCAGCTGGC------
 A C G T A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KMCAKTKGSCAGGCCY
-VCAGCTGBNN-----
 C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KMCAKTKGSCAGGCCY
TGCCCCAGGGCA-----
 A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KMCAKTKGSCAGGCCY
TGCCCCCGGGCA-----
 A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KMCAKTKGSCAGGCCY
TGCCCCAGGGCA-----
 A C G T C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:KMCAKTKGSCAGGCCY
----NTTGGCANN---
 C A T G G T A C A G T C G T C A A C T G A G C T A C T G A T C G A T C G G T A C G T C A C T A G A T C G T G A C A T G C A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T