Information for 12-CTACATAATT (Motif 31)

A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C T G
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 28.1bp
Average Position of motif in Background68.6 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTACATAATT-----
TATCATAATTAAGGA
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTACATAATT
ANGTTACATAA--
 A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T

PH0143.1_Pou2f1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTACATAATT-------
-TACTTAATTAATNNAN
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTACATAATT----
ATGAATAATTAATG
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTACATAATT--
----NTAATTGN
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

Dlx1/MA0879.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTACATAATT---
---NNTAATTANN
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

PH0022.1_Dlx3/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTACATAATT------
TCGCGATAATTACCGAC
 A C G T A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

DLX6/MA0882.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTACATAATT--
----NTAATTGN
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTACATAATT--
ATGCATAATTCA
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTACATAATT--
----NTAATTGN
 A G T C A C G T C G T A A G T C C G T A A C G T C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G