Information for 2-GSAGGAAWGTGKGGTM (Motif 3)

A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
Reverse Opposite:
C A T G G T C A G T A C G A T C G T A C T G A C C G T A A T G C G C T A A C G T A C G T A G T C A G T C A C G T A T G C G T A C
p-value:1e-14
log p-value:-3.333e+01
Information Content per bp:1.637
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.96%
Number of Background Sequences with motif286.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets44.1 +/- 27.6bp
Average Position of motif in Background46.6 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GSAGGAAWGTGKGGTM
-AAGGCAAGTGT----
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GSAGGAAWGTGKGGTM
-NTGGAATGTG-----
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GSAGGAAWGTGKGGTM
-NTGGAATGTN-----
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GSAGGAAWGTGKGGTM
CCWGGAATGY------
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GSAGGAAWGTGKGGTM
---GGGAATTGTAGT-
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GSAGGAAWGTGKGGTM
CCWGGAATGY------
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GSAGGAAWGTGKGGTM
--TGGAATGT------
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C
A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GSAGGAAWGTGKGGTM--
------NNHTGTGGTTWN
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GSAGGAAWGTGKGGTM--
--------CTGTGGTTTN
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GSAGGAAWGTGKGGTM-
------GTCTGTGGTTT
 A C T G A T C G G T C A C T A G A C T G T G C A T G C A C G A T A T C G A C G T A C T G C A T G C T A G A C T G C A G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T