Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-49 | -1.133e+02 | 0.0000 | 145.0 | 16.82% | 650.0 | 3.84% | motif file (matrix) |
svg |
2 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-48 | -1.114e+02 | 0.0000 | 184.0 | 21.35% | 1047.5 | 6.20% | motif file (matrix) |
svg |
3 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-47 | -1.092e+02 | 0.0000 | 236.0 | 27.38% | 1664.3 | 9.84% | motif file (matrix) |
svg |
4 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-45 | -1.046e+02 | 0.0000 | 123.0 | 14.27% | 502.9 | 2.97% | motif file (matrix) |
svg |
5 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-45 | -1.039e+02 | 0.0000 | 165.0 | 19.14% | 903.5 | 5.34% | motif file (matrix) |
svg |
6 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-43 | -1.003e+02 | 0.0000 | 217.0 | 25.17% | 1519.1 | 8.99% | motif file (matrix) |
svg |
7 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-42 | -9.699e+01 | 0.0000 | 143.0 | 16.59% | 729.0 | 4.31% | motif file (matrix) |
svg |
8 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-38 | -8.921e+01 | 0.0000 | 232.0 | 26.91% | 1828.2 | 10.81% | motif file (matrix) |
svg |
9 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-37 | -8.672e+01 | 0.0000 | 352.0 | 40.84% | 3600.2 | 21.30% | motif file (matrix) |
svg |
10 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-36 | -8.466e+01 | 0.0000 | 214.0 | 24.83% | 1648.9 | 9.75% | motif file (matrix) |
svg |
11 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-35 | -8.202e+01 | 0.0000 | 115.0 | 13.34% | 556.6 | 3.29% | motif file (matrix) |
svg |
12 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-34 | -8.054e+01 | 0.0000 | 292.0 | 33.87% | 2783.7 | 16.47% | motif file (matrix) |
svg |
13 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-32 | -7.567e+01 | 0.0000 | 179.0 | 20.77% | 1309.5 | 7.75% | motif file (matrix) |
svg |
14 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-31 | -7.353e+01 | 0.0000 | 102.0 | 11.83% | 487.8 | 2.89% | motif file (matrix) |
svg |
15 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-31 | -7.291e+01 | 0.0000 | 110.0 | 12.76% | 567.2 | 3.35% | motif file (matrix) |
svg |
16 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-23 | -5.304e+01 | 0.0000 | 225.0 | 26.10% | 2245.7 | 13.28% | motif file (matrix) |
svg |
17 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-19 | -4.469e+01 | 0.0000 | 60.0 | 6.96% | 278.7 | 1.65% | motif file (matrix) |
svg |
18 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.866e+01 | 0.0000 | 60.0 | 6.96% | 317.7 | 1.88% | motif file (matrix) |
svg |
19 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-14 | -3.272e+01 | 0.0000 | 95.0 | 11.02% | 772.0 | 4.57% | motif file (matrix) |
svg |
20 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-12 | -2.911e+01 | 0.0000 | 188.0 | 21.81% | 2170.1 | 12.84% | motif file (matrix) |
svg |
21 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-12 | -2.848e+01 | 0.0000 | 386.0 | 44.78% | 5578.0 | 32.99% | motif file (matrix) |
svg |
22 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-12 | -2.800e+01 | 0.0000 | 226.0 | 26.22% | 2807.2 | 16.60% | motif file (matrix) |
svg |
23 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.472e+01 | 0.0000 | 57.0 | 6.61% | 406.4 | 2.40% | motif file (matrix) |
svg |
24 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-9 | -2.255e+01 | 0.0000 | 31.0 | 3.60% | 152.0 | 0.90% | motif file (matrix) |
svg |
25 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-9 | -2.178e+01 | 0.0000 | 114.0 | 13.23% | 1214.3 | 7.18% | motif file (matrix) |
svg |
26 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-8 | -1.846e+01 | 0.0000 | 122.0 | 14.15% | 1411.2 | 8.35% | motif file (matrix) |
svg |
27 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.778e+01 | 0.0000 | 153.0 | 17.75% | 1918.2 | 11.35% | motif file (matrix) |
svg |
28 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-7 | -1.774e+01 | 0.0000 | 44.0 | 5.10% | 332.0 | 1.96% | motif file (matrix) |
svg |
29 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-7 | -1.760e+01 | 0.0000 | 122.0 | 14.15% | 1433.1 | 8.48% | motif file (matrix) |
svg |
30 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-7 | -1.755e+01 | 0.0000 | 121.0 | 14.04% | 1419.4 | 8.40% | motif file (matrix) |
svg |
31 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.723e+01 | 0.0000 | 52.0 | 6.03% | 437.3 | 2.59% | motif file (matrix) |
svg |
32 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-7 | -1.689e+01 | 0.0000 | 77.0 | 8.93% | 780.5 | 4.62% | motif file (matrix) |
svg |
33 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-6 | -1.507e+01 | 0.0000 | 122.0 | 14.15% | 1503.1 | 8.89% | motif file (matrix) |
svg |
34 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.426e+01 | 0.0000 | 176.0 | 20.42% | 2417.3 | 14.30% | motif file (matrix) |
svg |
35 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-6 | -1.421e+01 | 0.0000 | 41.0 | 4.76% | 340.0 | 2.01% | motif file (matrix) |
svg |
36 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-6 | -1.388e+01 | 0.0000 | 79.0 | 9.16% | 873.5 | 5.17% | motif file (matrix) |
svg |
37 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 20.0 | 2.32% | 107.3 | 0.63% | motif file (matrix) |
svg |
38 |
| p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer | 1e-5 | -1.362e+01 | 0.0000 | 12.0 | 1.39% | 39.2 | 0.23% | motif file (matrix) |
svg |
39 |
| p53(p53)/Saos-p53-ChIP-Seq/Homer | 1e-5 | -1.362e+01 | 0.0000 | 12.0 | 1.39% | 39.2 | 0.23% | motif file (matrix) |
svg |
40 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-5 | -1.327e+01 | 0.0000 | 35.0 | 4.06% | 278.9 | 1.65% | motif file (matrix) |
svg |
41 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-5 | -1.269e+01 | 0.0000 | 41.0 | 4.76% | 362.7 | 2.15% | motif file (matrix) |
svg |
42 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.241e+01 | 0.0000 | 36.0 | 4.18% | 302.6 | 1.79% | motif file (matrix) |
svg |
43 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-5 | -1.228e+01 | 0.0000 | 17.0 | 1.97% | 88.6 | 0.52% | motif file (matrix) |
svg |
44 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-5 | -1.179e+01 | 0.0001 | 9.0 | 1.04% | 25.6 | 0.15% | motif file (matrix) |
svg |
45 |
| E-box(bHLH)/Promoter/Homer | 1e-4 | -1.110e+01 | 0.0001 | 15.0 | 1.74% | 77.6 | 0.46% | motif file (matrix) |
svg |
46 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.092e+01 | 0.0001 | 98.0 | 11.37% | 1248.6 | 7.39% | motif file (matrix) |
svg |
47 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-4 | -1.060e+01 | 0.0002 | 101.0 | 11.72% | 1307.6 | 7.73% | motif file (matrix) |
svg |
48 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -1.047e+01 | 0.0002 | 215.0 | 24.94% | 3263.2 | 19.30% | motif file (matrix) |
svg |
49 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.016e+01 | 0.0003 | 35.0 | 4.06% | 323.0 | 1.91% | motif file (matrix) |
svg |
50 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-4 | -1.005e+01 | 0.0003 | 12.0 | 1.39% | 56.9 | 0.34% | motif file (matrix) |
svg |
51 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -9.533e+00 | 0.0005 | 94.0 | 10.90% | 1230.6 | 7.28% | motif file (matrix) |
svg |
52 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.228e+00 | 0.0007 | 144.0 | 16.71% | 2080.6 | 12.31% | motif file (matrix) |
svg |
53 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -9.186e+00 | 0.0007 | 22.0 | 2.55% | 171.1 | 1.01% | motif file (matrix) |
svg |
54 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -9.061e+00 | 0.0008 | 35.0 | 4.06% | 342.6 | 2.03% | motif file (matrix) |
svg |
55 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -8.985e+00 | 0.0008 | 31.0 | 3.60% | 289.2 | 1.71% | motif file (matrix) |
svg |
56 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.796e+00 | 0.0010 | 144.0 | 16.71% | 2100.9 | 12.43% | motif file (matrix) |
svg |
57 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -8.766e+00 | 0.0010 | 43.0 | 4.99% | 461.7 | 2.73% | motif file (matrix) |
svg |
58 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.551e+00 | 0.0012 | 45.0 | 5.22% | 496.0 | 2.93% | motif file (matrix) |
svg |
59 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-3 | -8.270e+00 | 0.0016 | 33.0 | 3.83% | 329.8 | 1.95% | motif file (matrix) |
svg |
60 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-3 | -8.233e+00 | 0.0016 | 91.0 | 10.56% | 1228.8 | 7.27% | motif file (matrix) |
svg |
61 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -8.207e+00 | 0.0016 | 79.0 | 9.16% | 1033.1 | 6.11% | motif file (matrix) |
svg |
62 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -8.175e+00 | 0.0017 | 39.0 | 4.52% | 416.6 | 2.46% | motif file (matrix) |
svg |
63 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -8.150e+00 | 0.0017 | 24.0 | 2.78% | 210.7 | 1.25% | motif file (matrix) |
svg |
64 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -8.142e+00 | 0.0017 | 30.0 | 3.48% | 291.0 | 1.72% | motif file (matrix) |
svg |
65 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -7.827e+00 | 0.0022 | 22.0 | 2.55% | 189.9 | 1.12% | motif file (matrix) |
svg |
66 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-3 | -7.826e+00 | 0.0022 | 41.0 | 4.76% | 453.2 | 2.68% | motif file (matrix) |
svg |
67 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-3 | -7.390e+00 | 0.0034 | 29.0 | 3.36% | 290.6 | 1.72% | motif file (matrix) |
svg |
68 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-3 | -7.106e+00 | 0.0044 | 17.0 | 1.97% | 136.9 | 0.81% | motif file (matrix) |
svg |
69 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-3 | -7.097e+00 | 0.0044 | 22.0 | 2.55% | 200.2 | 1.18% | motif file (matrix) |
svg |
70 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.067e+00 | 0.0044 | 202.0 | 23.43% | 3225.6 | 19.08% | motif file (matrix) |
svg |
71 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.768e+00 | 0.0059 | 26.0 | 3.02% | 261.0 | 1.54% | motif file (matrix) |
svg |
72 |
| ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.715e+00 | 0.0061 | 66.0 | 7.66% | 875.2 | 5.18% | motif file (matrix) |
svg |
73 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -6.684e+00 | 0.0062 | 38.0 | 4.41% | 436.6 | 2.58% | motif file (matrix) |
svg |
74 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -6.602e+00 | 0.0067 | 80.0 | 9.28% | 1110.9 | 6.57% | motif file (matrix) |
svg |
75 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.524e+00 | 0.0071 | 37.0 | 4.29% | 425.8 | 2.52% | motif file (matrix) |
svg |
76 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.492e+00 | 0.0073 | 29.0 | 3.36% | 308.6 | 1.83% | motif file (matrix) |
svg |
77 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.388e+00 | 0.0079 | 57.0 | 6.61% | 741.1 | 4.38% | motif file (matrix) |
svg |
78 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.300e+00 | 0.0086 | 32.0 | 3.71% | 356.9 | 2.11% | motif file (matrix) |
svg |
79 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.221e+00 | 0.0092 | 38.0 | 4.41% | 448.0 | 2.65% | motif file (matrix) |
svg |
80 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -6.062e+00 | 0.0106 | 37.0 | 4.29% | 437.8 | 2.59% | motif file (matrix) |
svg |
81 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.676e+00 | 0.0154 | 20.0 | 2.32% | 197.3 | 1.17% | motif file (matrix) |
svg |
82 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.433e+00 | 0.0194 | 43.0 | 4.99% | 549.4 | 3.25% | motif file (matrix) |
svg |
83 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-2 | -5.345e+00 | 0.0209 | 14.0 | 1.62% | 122.6 | 0.73% | motif file (matrix) |
svg |
84 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -5.199e+00 | 0.0239 | 20.0 | 2.32% | 206.8 | 1.22% | motif file (matrix) |
svg |
85 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -5.016e+00 | 0.0284 | 53.0 | 6.15% | 726.8 | 4.30% | motif file (matrix) |
svg |
86 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.910e+00 | 0.0312 | 112.0 | 12.99% | 1747.9 | 10.34% | motif file (matrix) |
svg |
87 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.799e+00 | 0.0345 | 12.0 | 1.39% | 104.4 | 0.62% | motif file (matrix) |
svg |
88 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | -4.781e+00 | 0.0347 | 63.0 | 7.31% | 903.5 | 5.34% | motif file (matrix) |
svg |