Information for 4-TTGTGAAGCA (Motif 9)

A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
Reverse Opposite:
C A G T T C A G A T G C C A G T G A C T A G T C G T C A G T A C G T C A T G C A
p-value:1e-11
log p-value:-2.643e+01
Information Content per bp:1.589
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif28.7
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets53.9 +/- 27.4bp
Average Position of motif in Background45.4 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTGTGAAGCA
---NGAAGC-
 A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTGAAGCA
TAGGTGTGAAG--
 A C G T A C G T A C G T A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGAAGCA
CSTGGGAAAD-
 A C G T A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTGTGAAGCA
AAGGTGTKAA---
 A C G T A C G T A C G T A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGTGAAGCA-
-TTTGAAACCG
 A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTGTGAAGCA
-----CAGCC
 A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTGTGAAGCA
AAGGTGTGAA---
 A C G T A C G T A C G T A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTGTGAAGCA
AGGTGTGAAA--
 A C G T A C G T A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGAAGCA
AGGTGTTAAT--
 A C G T A C G T A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTGTGAAGCA
ATTTGAATT-
 A C G T C A G T A C T G A C G T T C A G C T G A G C T A T A C G A G T C G T C A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T