Information for 17-ATGCAGAATG (Motif 33)

C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A G T C A C G T A C T G A T G C C G T A A C G T
p-value:1e-6
log p-value:-1.431e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.7 +/- 20.2bp
Average Position of motif in Background41.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAGAATG--
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGAATG---
WYATGCATWATGCAT
 A C G T A C G T C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGCAGAATG--
ATGCATAATTCA
 C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGCAGAATG--
--NTGGAATGTN
 C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGCAGAATG
ATGAATATTC
 C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGCAGAATG------
NNTNNACAATGGGANNN
 A C G T C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATGCAGAATG--
--NTGGAATGTG
 C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATGCAGAATG--
CAATTGCAAAAATAT
 A C G T A C G T A C G T C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATGCAGAATG--
---GACAATGNN
 C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGCAGAATG-----
ATGAATWATTCATGA
 C G T A A C G T A T C G A G T C C G T A A C T G C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A