Information for 16-GCATGMGGCT (Motif 32)

A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T
Reverse Opposite:
C T G A A C T G T A G C A G T C A C T G G A T C C T G A A C G T C T A G A G T C
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.803
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets27.3 +/- 18.5bp
Average Position of motif in Background44.0 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCATGMGGCT
TGCCTGAGGCN
 A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCATGMGGCT
NGCCTNAGGCN
 A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCATGMGGCT
NGCCTGAGGCN
 A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCATGMGGCT--
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCATGMGGCT--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

NEUROD2/MA0668.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCATGMGGCT
ACCATATGGC-
 A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCATGMGGCT--
-CATGCGGGTAC
 A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T A C G T A C G T
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCATGMGGCT
WTGSCCTSAGGS-
 A C G T A C G T A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCATGMGGCT-
GTGCCACGCGACTG
 A C G T A C G T A C G T A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GCATGMGGCT-
------NGCTN
 A C T G G A T C T C G A G A C T C T A G T G A C A C T G A T C G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G